Scientific Citations

Authors Title Year Journal URL
G. Beyene, F. R. Solomon, R. D. Chauhan, E. Gaitan-Solis, N. Narayanan, J. Gehan, D. Siritunga, R. L. Stevens, J. Jifon, J. Van Eck, E. Linsler, M. Gehan, M. Ilyas, M. Fregene, R. T. Sayre, P. Anderson, N. J. Taylor and E. B. Cahoon Provitamin A biofortification of cassava enhances shelf life but reduces dry matter content of storage roots due to altered carbon partitioning into starch. 2017 Plant Biotechnol J Article
P. Bustos, R. I. Santamaria, O. M. Perez-Carrascal, J. L. Acosta, L. Lozano, S. Juarez, I. A.-O. h. o. o. Martinez-Flores, E. Martinez-Romero, M. A. Cevallos, D. Romero, G. Davila, P. Vinuesa, F. Miranda, E. Ormeno and V. Gonzalez Complete Genome Sequences of Three Rhizobium gallicum Symbionts Associated with Common Bean (Phaseolus vulgaris). 2017 Genome Announcements Article
Q. Li, C. L. Lauber, G. Czarnecki-Maulden, Y. Pan and S. S. Hannah Effects of the Dietary Protein and Carbohydrate Ratio on Gut Microbiomes in Dogs of Different Body Conditions. 2017 MBio Article
V. G. Paul, D. J. Wronkiewicz and M. R. Mormile Impact of elevated CP1 concentrations on carbonate mineral precipitation ability of sulfate-reducing bacteria and implications for CP1 sequestration. 2017 Applied Geochemistry Article
R. I. Santamaria, P. Bustos, O. M. Perez-Carrascal, F. Miranda-Sanchez, P. Vinuesa, I. Martinez-Flores, S. Juarez, L. Lozano, E. Martinez-Romero, M. A. Cevallos, D. Romero, G. Davila, E. Ormeno-Orrillo and V. Gonzalez Complete Genome Sequences of Eight Rhizobium Symbionts Associated with Common Bean (Phaseolus vulgaris). 2017 Genome Announcements Article
H. Huang, M. A. Gehan, S. E. Huss, S. Alvarez, C. Lizarraga, E. L. Gruebbling, J. Gierer, M. J. Naldrett, R. K. Bindbeutel, B. S. Evans, T. C. Mockler, D. A. Nusinow Cross-species complementation reveals conserved functions for EARLY FLOWERING 3 between monocots and dicot 2017 Plant Direct Article
Y. Yang and T. M. Davis A New Perspective on Polyploid Fragaria (Strawberry) Genome Composition Based on Large-Scale, Multi-Locus Phylogenetic Analysis. 2017 Genome Biol Evol Article
R. T. Swords, D. Azzam, H. Al-Ali, I. Lohse, C. H. Volmar, J. M. Watts, A. Perez, A. Rodriguez, F. Vargas, R. Elias, F. Vega, A. Zelent, S. P. Brothers, T. Abbasi, J. Trent, S. Rangwala, Y. Deutsch, E. Conneally, L. Drusbosky, C. R. Cogle and C. Wahlestedt Ex-vivo sensitivity profiling to guide clinical decision making in acute myeloid leukemia: A pilot study. 2018 Leuk Res Article
M. N. Uddin, D. A. Sultana, K. J. Lorentsen, J. J. Cho, M. E. Kirst, M. L. Brantly, D. Califano, D. B. Sant’Angelo and D. Avram Transcription factor Bcl11b sustains iNKT1 and iNKT2 cell programs, restricts iNKT17 cell program, and governs iNKT cell survival. 2016 Proc Natl Acad Sci U S A Article
M. P. Sherman, J. Sherman, R. Arcine, V. Niklas Randomized Control Trial of Human Recombinant Lactoferrin: A Substudy Reveals Effects on the Fecal Microbiome of Very Low Birth Weight Infants. 2016 J Pediatr. Article
A. N. Mardaryev, B. Liu, V. Rapisarda, K. Poterlowicz, I. Malashchuk, J. Rudolf, A. A. Sharov, C. A. Jahoda, M. Y. Fessing, S. A. Benitah, G. L. Xu and V. A. Botchkarev Cbx4 maintains the epithelial lineage identity and cell proliferation in the developing stratified epithelium 2016 J Cell Biol Article
J. Solis, N. Baisakh, S. R. Brandt, A. Villordon and D. La Bonte Transcriptome Profiling of Beach Morning Glory (Ipomoea imperati) under Salinity and Its Comparative Analysis with Sweetpotato 2016 PloS one Article
G. R. Linares, C. T. Chiu, L. Scheuing, Y. Leng, H. M. Liao, D. Maric and D. M. Chuang Preconditioning mesenchymal stem cells with the mood stabilizers lithium and valproic acid enhances therapeutic efficacy in a mouse model of Huntington’s disease 2016 Exp Neurol Article
J. Yu, M. Liberton, P. F. Cliften, R. D. Head, J. M. Jacobs, R. D. Smith, D. W. Koppenaal, J. J. Brand and H. B. Pakrasi Synechococcus elongatus UTEX 2973, a fast growing cyanobacterial chassis for biosynthesis using light and CO(2) 2015 Sci Rep Article
D. Kersulyte, M. T. Bertoli, S. Tamma, M. Keelan, R. Munday, J. Geary, S. Veldhuyzen van Zanten, K. J. Goodman and D. E. Berg Complete Genome Sequences of Two Helicobacter pylori Strains from a Canadian Arctic Aboriginal Community 2015 Genome Announc Article
S. Shinde, A. Behpouri, J. C. McElwain and C. K. Ng Genome-wide transcriptomic analysis of the effects of sub-ambient atmospheric oxygen and elevated atmospheric carbon dioxide levels on gametophytes of the moss, Physcomitrella patens 2015 J Exp Bot Article
P. Tripathi, R. C. Rabara, M. K. Choudhary, M. A. Miller, Y. S. Huang, Q. J. Shen, S. Blachon and P. J. Rushton The interactome of soybean GmWRKY53 using yeast 2-hybrid library screening to saturation 2015 Plant Signal Behav Article
G. C. Port, E. Paluscio and M. G. Caparon Complete Genome Sequences of emm6 Streptococcus pyogenes JRS4 and Parental Strain D471 2015 Genome Announc Article
M. Ong-Abdullah, J. M. Ordway, N. Jiang, S. E. Ooi, S. Y. Kok, N. Sarpan, N. Azimi, A. T. Hashim, Z. Ishak, S. K. Rosli, F. A. Malike, N. A. Bakar, M. Marjuni, N. Abdullah, Z. Yaakub, M. D. Amiruddin, R. Nookiah, R. Singh, E. T. Low, K. L. Chan, N. Azizi, S. W. Smith, B. Bacher, M. A. Budiman, A. Van Brunt, C. Wischmeyer, M. Beil, M. Hogan, N. Lakey, C. C. Lim, X. Arulandoo, C. K. Wong, C. N. Choo, W. C. Wong, Y. Y. Kwan, S. S. Alwee, R. Sambanthamurthi and R. A. Martienssen Loss of Karma transposon methylation underlies the mantled somaclonal variant of oil palm 2015 Nature Article
A. M. Spain, M. S. Elshahed, F. Z. Najar and L. R. Krumholz Metatranscriptomic analysis of a high-sulfide aquatic spring reveals insights into sulfur cycling and unexpected aerobic metabolism 2015 Peerj Article
R. C. Rabara, P. Tripathi, M. K. Choudhary, M. P. Timko, Q. J. Shen and P. J. Rushton Transcriptome profiling of tobacco under water deficit conditions 2015 Genom Data Article
P. Tripathi, R. C. Rabara, Q. J. Shen and P. J. Rushton Transcriptomics analyses of soybean leaves and roots sample during water-deficit 2015 Genomics Data Article
R. B. Batchu, O. V. Gruzdyn, C. S. Bryant, A. M. Qazi, S. Kumar, S. Chamala, S. T. Kung, R. S. Sanka, U. S. Puttagunta, D. W. Weaver and S. A. Gruber Ritonavir-Mediated Induction of Apoptosis in Pancreatic Cancer Occurs via the RB/E2F-1 and AKT Pathways 2014 Pharmaceuticals (Basel) Article
M. A. Rogel, P. Bustos, R. I. Santamaria, V. Gonzalez, D. Romero, M. A. Cevallos, L. Lozano, J. Castro-Mondragon, J. Martinez-Romero, E. Ormeno-Orrillo and E. Martinez-Romero Genomic basis of symbiovar mimosae in Rhizobium etli 2014 BMC genomics Article
A. J. Knox, A. L. Scaling, M. P. Pinto, B. S. Bliesner, J. M. Haughian, H. A. Abdel-Hafiz and K. B. Horwitz Modeling luminal breast cancer heterogeneity: combination therapy to suppress a hormone receptor-negative, cytokeratin 5-positive subpopulation in luminal disease 2014 Breast Cancer Res Article
M. P. Sherman, J. Minnerly, W. Curtiss, S. Rangwala and S. T. Kelley Research on neonatal microbiomes: what neonatologists need to know 2014 Neonatology Article
Q. Liu, J. M. Spitsbergen, R. Cariou, C.-Y. Huang, N. Jiang, G. Goetz, R. J. Hutz, P. J. Tonellato and M. J. Carvan III Histopathologic Alterations Associated with Global Gene Expression Due to Chronic Dietary TCDD Exposure in Juvenile Zebrafish 2014 PloS one Article
H. Banerjee, G. Hyman, S. Evans, V. Manglik, E. Gwebu, A. Banerjee, D. Vaughan, J. Medley, C. Krauss and J. Wilkins Identification of the Transmembrane Glucose Regulated Protein 78 as a Biomarker for the Brain Cancer Glioblastoma Multiforme by Gene Expression and Proteomic Studies 2014 Journal of Membrane Science & Technology Article
S. M. Carroll and C. J. Marx Evolution after introduction of a novel metabolic pathway consistently leads to restoration of wild-type physiology 2013 PLoS Genet Article
R. Singh, M. Ong-Abdullah, E. T. Low, M. A. Manaf, R. Rosli, R. Nookiah, L. C. Ooi, S. E. Ooi, K. L. Chan, M. A. Halim, N. Azizi, J. Nagappan, B. Bacher, N. Lakey, S. W. Smith, D. He, M. Hogan, M. A. Budiman, E. K. Lee, R. DeSalle, D. Kudrna, J. L. Goicoechea, R. A. Wing, R. K. Wilson, R. S. Fulton, J. M. Ordway, R. A. Martienssen and R. Sambanthamurthi Oil palm genome sequence reveals divergence of interfertile species in Old and New worlds 2013 Nature Article
M. T. O’Donoghue, C. Chater, S. Wallace, J. E. Gray, D. J. Beerling and A. J. Fleming Genome-wide transcriptomic analysis of the sporophyte of the moss Physcomitrella patens 2013 J Exp Bot Article
Y. Fang, V. Gupta, R. Karra, J. E. Holdway, K. Kikuchi and K. D. Poss Translational profiling of cardiomyocytes identifies an early Jak1/Stat3 injury response required for zebrafish heart regeneration 2013 Proc Natl Acad Sci U S A Article
G. C. Port, E. Paluscio and M. G. Caparon Complete Genome Sequence of emm Type 14 Streptococcus pyogenes Strain HSC5 2013 Genome Announc Article
J. Miller, A. Dakic, R. Chen, N. Palechor-Ceron, Y. Dai, B. Kallakury, R. Schlegel and X. Liu HPV16 E7 protein and hTERT proteins defective for telomere maintenance cooperate to immortalize human keratinocytes 2013 PLoS pathogens Article
Y. Mao, A. Fu, D. Leaderer, T. Zheng, K. Chen and Y. Zhu Potential cancer-related role of circadian gene TIMELESS suggested by expression profiling and in vitro analyses 2013 BMC cancer Article
A. E. Hoffman, R. Liu, A. Fu, T. Zheng, F. Slack and Y. Zhu Targetome profiling, pathway analysis and genetic association study implicate miR-202 in lymphomagenesis 2013 Cancer Epidemiology Biomarkers & Prevention Article
P. Gut, B. Baeza-Raja, O. Andersson, L. Hasenkamp, J. Hsiao, D. Hesselson, K. Akassoglou, E. Verdin, M. D. Hirschey and D. Y. Stainier Whole-organism screening for gluconeogenesis identifies activators of fasting metabolism 2013 Nature chemical biology Article
Q. Liu, N. Basu, G. Goetz, N. Jiang, R. J. Hutz, P. J. Tonellato and M. J. Carvan III Differential gene expression associated with dietary methylmercury (MeHg) exposure in rainbow trout (Oncorhynchus mykiss) and zebrafish (Danio rerio) 2013 Ecotoxicology Article
S. S. Duncan, M. T. Bertoli, D. Kersulyte, P. L. Valk, S. Tamma, I. Segal, M. S. McClain, T. L. Cover and D. E. Berg Genome sequences of three hpAfrica2 strains of Helicobacter pylori 2013 Genome announcements Article
R. Aurora, D. Chatterjee, J. Hentzleman, G. Prasad, R. Sindwani and T. Sanford Contrasting the microbiomes from healthy volunteers and patients with chronic rhinosinusitis 2013 JAMA Otolaryngology–Head & Neck Surgery Article
E. V. Abel, K. J. Basile, C. H. Kugel III, A. K. Witkiewicz, K. Le, R. K. Amaravadi, G. C. Karakousis, X. Xu, W. Xu and L. M. Schuchter Melanoma adapts to RAF/MEK inhibitors through FOXD3-mediated upregulation of ERBB3 2013 The Journal of clinical investigation Article
V. P. Yin, A. Lepilina, A. Smith and K. D. Poss Regulation of zebrafish heart regeneration by miR-133 2012 Dev Biol Article
P. R. Young, J. G. Lashbrooke, E. Alexandersson, D. Jacobson, C. Moser, R. Velasco and M. A. Vivier The genes and enzymes of the carotenoid metabolic pathway in Vitis vinifera L 2012 BMC genomics Article
S. J. Shallom, H. Tae, L. Sarmento, D. Preston, L. McIver, C. Franck, A. Dickerman, L. G. Adams and H. R. Garner Comparison of genome diversity of Brucella spp. field isolates using Universal Bio-signature Detection Array and whole genome sequencing reveals limitations of current diagnostic methods 2012 Gene Article
S. Woo, M. P. Housley, O. D. Weiner and D. Y. Stainier Nodal signaling regulates endodermal cell motility and actin dynamics via Rac1 and Prex1 2012 The Journal of cell biology Article
Y. Wang, X. Zeng, N. J. Iyer, D. W. Bryant, T. C. Mockler and R. Mahalingam Exploring the switchgrass transcriptome using second-generation sequencing technology 2012 PloS one Article
T. T. Vu, S. M. Stolyar, G. E. Pinchuk, E. A. Hill, L. A. Kucek, R. N. Brown, M. S. Lipton, A. Osterman, J. K. Fredrickson and A. E. Konopka Genome-scale modeling of light-driven reductant partitioning and carbon fluxes in diazotrophic unicellular cyanobacterium Cyanothece sp. ATCC 51142 2012 PLoS computational biology Article
S. B. Roberts, L. Hauser, L. W. Seeb and J. E. Seeb Development of genomic resources for Pacific Herring through targeted transcriptome pyrosequencing 2012 PloS one Article
P. B. Noto, Y. Bukhtiyarov, M. Shi, B. M. McKeever, G. M. McGeehan and D. S. Lala Regulation of Sphingomyelin Phosphodiesterase Acid-Like 3A Gene (SMPDL3A) by Liver X Receptors 2012 Molecular pharmacology Article
J. K. Muhlemann, H. Maeda, C.-Y. Chang, P. San Miguel, I. Baxter, B. Cooper, M. A. Perera, B. J. Nikolau, O. Vitek and J. A. Morgan Developmental changes in the metabolic network of snapdragon flowers 2012 PloS one Article
A. Morales La Madrid, S. Volchenboum, J. M. Gastier‐Foster, R. Pyatt, D. Liu, P. Pytel, C. Lavarino, E. Rodriguez and S. L. Cohn Locoregional MYCN‐amplified neuroblastoma 2012 Pediatric blood & cancer Article
A. Q. Bonilla, L. J. Oliveira, M. Ozawa, E. M. Newsom, M. C. Lucy and P. J. Hansen Developmental changes in thermoprotective actions of insulin-like growth factor-1 on the preimplantation bovine embryo 2011 Mol Cell Endocrinol Article
A. D. Krentz, M. W. Murphy, A. L. Sarver, M. D. Griswold, V. J. Bardwell and D. Zarkower DMRT1 promotes oogenesis by transcriptional activation of Stra8 in the mammalian fetal ovary 2011 Dev Biol Article
J. Vanvalkenburgh, D. I. Albu, C. Bapanpally, S. Casanova, D. Califano, D. M. Jones, L. Ignatowicz, S. Kawamoto, S. Fagarasan, N. A. Jenkins, N. G. Copeland, P. Liu and D. Avram Critical role of Bcl11b in suppressor function of T regulatory cells and prevention of inflammatory bowel disease 2011 J Exp Med Article
A. N. Mardaryev, N. Meier, K. Poterlowicz, A. A. Sharov, T. Y. Sharova, M. I. Ahmed, V. Rapisarda, C. Lewis, M. Y. Fessing, T. M. Ruenger, J. Bhawan, S. Werner, R. Paus and V. A. Botchkarev Lhx2 differentially regulates Sox9, Tcf4 and Lgr5 in hair follicle stem cells to promote epidermal regeneration after injury 2011 Development Article
N. Thirunavukkarasusx, K. J. Ghosal, R. Kukreja, Y. Zhou, A. Dombkowski, S. Cai and B. R. Singh Microarray analysis of differentially regulated genes in human neuronal and epithelial cell lines upon exposure to type A botulinum neurotoxin 2011 Biochemical and biophysical research communications Article
E. Jaligot, S. Adler, E. Debladis, T. Beulé, F. Richaud, P. Ilbert, E. J. Finnegan and A. Rival Epigenetic imbalance and the floral developmental abnormality of the in vitro-regenerated oil palm Elaeis guineensis 2011 Annals of botany Article
A. Heyland, Z. Vue, C. R. Voolstra, M. Medina and L. L. Moroz Developmental transcriptome of Aplysia californica’ 2011 Journal of Experimental Zoology Part B: Molecular and Developmental Evolution Article
M. Y. Fessing, A. N. Mardaryev, M. R. Gdula, A. A. Sharov, T. Y. Sharova, V. Rapisarda, K. B. Gordon, A. D. Smorodchenko, K. Poterlowicz and G. Ferone p63 regulates Satb1 to control tissue-specific chromatin remodeling during development of the epidermis 2011 The Journal of cell biology Article
C. Yi, L. Mu, I. A. de la Longrais, O. Sochirca, R. Arisio, H. Yu, A. E. Hoffman, Y. Zhu and D. Katsaro The circadian gene NPAS2 is a novel prognostic biomarker for breast cancer 2010 Breast Cancer Res Treat Article
D. L. Villeneuve, N. Garcia-Reyero, D. Martinovic, N. D. Mueller, J. E. Cavallin, E. J. Durhan, E. A. Makynen, K. M. Jensen, M. D. Kahl, L. S. Blake, E. J. Perkins and G. T. Ankley II: Effects of a dopamine receptor antagonist on fathead minnow dominance behavior and ovarian gene expression in the fathead minnow and zebrafish 2010 Ecotoxicol Environ Saf Article
Y. Okubo, S. Yang, L. Chistoserdova and M. E. Lidstrom Alternative route for glyoxylate consumption during growth on two-carbon compounds by Methylobacterium extorquens AM1 2010 J Bacteriol Article
A. A. Kiessling, R. Bletsa, B. Desmarais, C. Mara, K. Kallianidis and D. Loutradis Genome-wide microarray evidence that 8-cell human blastomeres over-express cell cycle drivers and under-express checkpoints 2010 J Assist Reprod Genet Article
A. N. Mardaryev, M. I. Ahmed, N. V. Vlahov, M. Y. Fessing, J. H. Gill, A. A. Sharov and N. V. Botchkareva Micro-RNA-31 controls hair cycle-associated changes in gene expression programs of the skin and hair follicle 2010 FASEB J Article
S. R. Sudarshan, R. Schlegel and X. Liu The HPV-16 E5 protein represses expression of stress pathway genes XBP-1 and COX-2 in genital keratinocytes 2010 Biochem Biophys Res Commun Article
L. J. Oliveira, S. McClellan and P. J. Hansen Differentiation of the endometrial macrophage during pregnancy in the cow 2010 PloS one Article
E. Skovran, G. J. Crowther, X. Guo, S. Yang and M. E. Lidstrom A systems biology approach uncovers cellular strategies used by Methylobacterium extorquens AM1 during the switch from multi- to single-carbon growth 2010 PloS one Article
J. Zhang, D. Zhao, H. K. Park, H. Wang, R. B. Dyer, W. Liu, G. G. Klee, M. A. McNiven, D. J. Tindall and J. R. Molina FAVL elevation in human tumors disrupts Fanconi anemia pathway signaling and promotes genomic instability and tumor growth 2010 The Journal of clinical investigation Article
A. Rival and E. Jaligot Oil palm biotechnologies are definitely out of infancy 2010 Oléagineux, Corps gras, Lipides Article
A. E. Hoffman, T. Zheng, C.-H. Yi, R. G. Stevens, Y. Ba, Y. Zhang, D. Leaderer, T. Holford, J. Hansen and Y. Zhu The core circadian gene Cryptochrome 2 influences breast cancer risk, possibly by mediating hormone signaling 2010 Cancer Prevention Research Article
A. E. Hoffman, T. Zheng, Y. Ba, R. G. Stevens, C.-H. Yi, D. Leaderer and Y. Zhu Phenotypic effects of the circadian gene Cryptochrome 2 on cancer-related pathways 2010 BMC cancer Article
A. E. Hoffman, C.-H. Yi, T. Zheng, R. G. Stevens, D. Leaderer, Y. Zhang, T. R. Holford, J. Hansen, J. Paulson and Y. Zhu CLOCK in breast tumorigenesis: genetic, epigenetic, and transcriptional profiling analyses 2010 Cancer research Article
T. A. Gruber, M. S. Chang, R. Sposto and M. Müschen Activation-Induced Cytidine Deaminase Accelerates Clonal Evolution in BCR-ABL1–Driven B-Cell Lineage Acute Lymphoblastic Leukemia 2010 Cancer research Article
C. S. Bryant, S. Kumar, S. Chamala, J. Shah, J. Pal, M. Haider, S. Seward, A. M. Qazi, R. Morris and A. Semaan Sulforaphane induces cell cycle arrest by protecting RB-E2F-1 complex in epithelial ovarian cancer cells 2010 Molecular cancer Article
E. W. Taliercio, G. Romano, J. Scheffler and B. G. Ayre Expression of genes associated with carbohydrate metabolism in cotton stems and roots 2009 BMC Plant Biol Article
S. A. Waggoner, G. J. Johannes and S. A. Liebhaber Depletion of the poly(C)-binding proteins alphaCP1 and alphaCP2 from K562 cells leads to p53-independent induction of cyclin-dependent kinase inhibitor (CDKN1A) and G1 arrest 2009 J Biol Chem Article
A. Francez-Charlot, J. Frunzke, C. Reichen, J. Z. Ebneter, B. Gourion and J. A. Vorholt Sigma factor mimicry involved in regulation of general stress response 2009 Proc Natl Acad Sci U S A Article
A. A. Kiessling, R. Bletsa, B. Desmarais, C. Mara, K. Kallianidis and D. Loutradis Evidence that human blastomere cleavage is under unique cell cycle control 2009 J Assist Reprod Genet Article
T. Elvitigala, J. Stockel, B. K. Ghosh and H. B. Pakrasi Effect of continuous light on diurnal rhythms in Cyanothece sp. ATCC 51142 2009 BMC genomics Article
C. H. Yi, T. Zheng, D. Leaderer, A. Hoffman and Y. Zhu Cancer-related transcriptional targets of the circadian gene NPAS2 identified by genome-wide ChIP-on-chip analysis 2009 Cancer Lett Article
E. Kiapekou, D. Loutradis, G. Mastorakos, R. Bletsa, P. Beretsos, E. Zapanti, P. Drakakis, A. Antsaklis and A. A. Kiessling Effect of PRL on in vitro follicle growth, in vitro oocyte maturation, fertilization and early embryonic development in mice 2009 Cloning Stem Cells Article
B. Gourion, S. Sulser, J. Frunzke, A. Francez-Charlot, P. Stiefel, G. Pessi, J. A. Vorholt and H. M. Fischer The PhyR-sigma(EcfG) signalling cascade is involved in stress response and symbiotic efficiency in Bradyrhizobium japonicum 2009 Mol Microbiol Article
A. E. Hoffman, T. Zheng, C. Yi, D. Leaderer, J. Weidhaas, F. Slack, Y. Zhang, T. Paranjape and Y. Zhu microRNA miR-196a-2 and breast cancer: a genetic and epigenetic association study and functional analysis 2009 Cancer Res Article
A. A. Sharov, A. N. Mardaryev, T. Y. Sharova, M. Grachtchouk, R. Atoyan, H. R. Byers, J. T. Seykora, P. Overbeek, A. Dlugosz and V. A. Botchkarev Bone morphogenetic protein antagonist noggin promotes skin tumorigenesis via stimulation of the Wnt and Shh signaling pathways 2009 Am J Pathol Article
A. K. Singh, M. Bhattacharyya-Pakrasi, T. Elvitigala, B. Ghosh, R. Aurora and H. B. Pakrasi A systems-level analysis of the effects of light quality on the metabolism of a cyanobacterium 2009 Plant Physiol Article
A. J. Charron and R. S. Quatrano Between a rock and a dry place: the water-stressed moss 2009 Mol Plant Article
C. A. Thibodeaux, X. Liu, G. L. Disbrow, Y. Zhang, J. D. Rone, B. R. Haddad and R. Schlegel Immortalization and transformation of human mammary epithelial cells by a tumor-derived Myc mutant 2009 Breast cancer research and treatment Article
M. Pfalz, H. Vogel and J. Kroymann The gene controlling the indole glucosinolate modifier1 quantitative trait locus alters indole glucosinolate structures and aphid resistance in Arabidopsis 2009 The Plant Cell Online Article
B. Mukherjee, N. Telang and G. Wong Growth inhibition of estrogen receptor positive human breast cancer cells by Taheebo from the inner bark of Tabebuia avellandae tree 2009 International journal of molecular medicine Article
D. Martinovic, D. L. Villeneuve, M. D. Kahl, L. S. Blake, J. D. Brodin and G. T. Ankley Hypoxia alters gene expression in the gonads of zebrafish (Danio rerio) 2009 Aquatic toxicology Article
J. Toepel, E. Welsh, T. C. Summerfield, H. B. Pakrasi and L. A. Sherman Differential transcriptional analysis of the cyanobacterium Cyanothece sp. strain ATCC 51142 during light-dark and continuous-light growth 2008 J Bacteriol Article
J. Stockel, E. A. Welsh, M. Liberton, R. Kunnvakkam, R. Aurora and H. B. Pakrasi Global transcriptomic analysis of Cyanothece 51142 reveals robust diurnal oscillation of central metabolic processes 2008 Proc Natl Acad Sci U S A Article
L. A. Worley, M. D. Long, M. D. Onken and J. W. Harbour Micro-RNAs associated with metastasis in uveal melanoma identified by multiplexed microarray profiling 2008 Melanoma Res Article
A. K. Singh, T. Elvitigala, M. Bhattacharyya-Pakrasi, R. Aurora, B. Ghosh and H. B. Pakrasi Integration of carbon and nitrogen metabolism with energy production is crucial to light acclimation in the cyanobacterium Synechocystis 2008 Plant Physiol Article
A. Khandelwal, T. Elvitigala, B. Ghosh and R. S. Quatrano Arabidopsis transcriptome reveals control circuits regulating redox homeostasis and the role of an AP2 transcription factor 2008 Plant Physiol Article
S. M. Hoke, J. Genereaux, G. Liang and C. J. Brandl A conserved central region of yeast Ada2 regulates the histone acetyltransferase activity of Gcn5 and interacts with phospholipids 2008 Journal of molecular biology Article
B. Gourion, A. Francez-Charlot and J. A. Vorholt PhyR is involved in the general stress response of Methylobacterium extorquens AM1 2008 Journal of bacteriology Article
E. W. Taliercio and D. Boykin Analysis of gene expression in cotton fiber initials 2007 BMC Plant Biol Article
B. Li, M. Gogol, M. Carey, D. Lee, C. Seidel and J. L. Workman Combined action of PHD and chromo domains directs the Rpd3S HDAC to transcribed chromatin 2007 Science Article
Y. Okubo, E. Skovran, X. Guo, D. Sivam and M. E. Lidstrom Implementation of microarrays for Methylobacterium extorquens AM1 2007 OMICS Article
A. I. Mutiu, S. M. Hoke, J. Genereaux, G. Liang and C. J. Brandl The role of histone ubiquitylation and deubiquitylation in gene expression as determined by the analysis of an HTB1 K123R Saccharomyces cerevisiae strain 2007 Molecular Genetics and Genomics Article
A. I. Mutiu, S. M. Hoke, J. Genereaux, C. Hannam, K. MacKenzie, O. Jobin-Robitaille, J. Guzzo, J. Côté, B. Andrews and D. B. Haniford Structure/function analysis of the phosphatidylinositol-3-kinase domain of yeast tra1 2007 Genetics Article
J. Kiesel, C. Miller, Y. Abu‐Amer and R. Aurora Systems level analysis of osteoclastogenesis reveals intrinsic and extrinsic regulatory interactions 2007 Developmental Dynamics Article
A. C. Cuming, S. H. Cho, Y. Kamisugi, H. Graham and R. S. Quatrano Microarray analysis of transcriptional responses to abscisic acid and osmotic, salt, and drought stress in the moss, Physcomitrella patens 2007 New Phytologist Article
N. Gomez-Ospina, F. Tsuruta, O. Barreto-Chang, L. Hu and R. Dolmetsch The C terminus of the L-type voltage-gated calcium channel Ca(V)1.2 encodes a transcription factor 2006 Cell Article
A. A. Sharov, T. Y. Sharova, A. N. Mardaryev, A. Tommasi di Vignano, R. Atoyan, L. Weiner, S. Yang, J. L. Brissette, G. P. Dotto and V. A. Botchkarev Bone morphogenetic protein signaling regulates the size of hair follicles and modulates the expression of cell cycle-associated genes 2006 Proc Natl Acad Sci U S A Article
Y.-S. You, H. Marella, R. Zentella, Y. Zhou, T. Ulmasov, T.-H. D. Ho and R. S. Quatrano Use of bacterial quorum-sensing components to regulate gene expression in plants 2006 Plant physiology Article
L. L. Moroz, J. R. Edwards, S. V. Puthanveettil, A. B. Kohn, T. Ha, A. Heyland, B. Knudsen, A. Sahni, F. Yu and L. Liu Neuronal transcriptome of Aplysia: neuronal compartments and circuitry 2006 Cell Article
D. Gershon DNA microarrays: more than gene expression 2005 Nature Article
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